Package: ecostats 1.1.11

ecostats: Code and Data Accompanying the Eco-Stats Text (Warton 2022)

Functions and data supporting the Eco-Stats text (Warton, 2022, Springer), and solutions to exercises. Functions include tools for using simulation envelopes in diagnostic plots, and a function for diagnostic plots of multivariate linear models. Datasets mentioned in the package are included here (where not available elsewhere) and there is a vignette for each chapter of the text with solutions to exercises.

Authors:David Warton [aut, cre], Christopher Chung [ctb], Mark Donoghoe [ctb], Eve Slavich [ctb]

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ecostats.pdf |ecostats.html✨
ecostats/json (API)

# Install 'ecostats' in R:
install.packages('ecostats', repos = c('https://dwarton.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/dwarton/ecostats/issues

Pkgdown site:https://dwarton.github.io

Datasets:
  • Myrtaceae - Species richness of _Myrtaceae_ plants
  • aphids - Aphid data
  • aphidsBACI - Aphid data as a BACI design
  • estuaries - Effect of pollution on marine microinvertebrates in estuaries
  • estuaryZone - Effect of pollution on marine microinvertebrates in estuaries in different zones
  • globalPlants - Global Plants data
  • guineapig - Guineapig data
  • headbobLizards - Headbob displays of _Anolis_ lizards
  • maunaloa - Atmospheric carbon dioxide concentration from the Mauna Loa Observatory
  • ravens - Ravens data
  • reveg - Invertebrate abundances in a revegetation study
  • seaweed - Habitat Configuration data from seaweed experiment
  • seedsTemp - Germination rates of _Abutilon angulatum_ at different temperatures
  • snowmelt - How flowering time relates to snowmelt date
  • waterQuality - Water Quality data
  • windFarms - Data from wind farm study

On CRAN:

6.58 score 8 stars 53 scripts 495 downloads 7 exports 62 dependencies

Last updated 11 months agofrom:2a6c608f26. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 03 2025
R-4.5-winOKFeb 03 2025
R-4.5-macOKFeb 03 2025
R-4.5-linuxOKFeb 03 2025
R-4.4-winOKFeb 03 2025
R-4.4-macOKFeb 03 2025
R-4.3-winOKFeb 03 2025
R-4.3-macOKFeb 03 2025

Exports:addSmoothanovaPBBlockBootIDcpredictcresidualsplotenvelopeqqenvelope

Dependencies:betaregcliclustercodacodetoolscolorspacecpp11doParallelecoCopulafansifarverflexmixforeachFormulaGETggplot2glassoglm2gluegridExtragtableigraphisobanditeratorslabelinglatticelifecyclelmtestmagrittrMASSMatrixmgcvmodeltoolsmunsellmvabundmvtnormnetworknlmennetnumDerivordinalpillarpkgconfigplyrR6RColorBrewerRcppRcppGSLrlangsandwichscalessnastatmodstatnet.commontibbletweedieucminfutf8vctrsviridisLitewithrzoo

Chapter 1 -- 'STATS 101' Revision -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter1Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-06-09
Started: 2021-03-09

Chapter 10 -- Analysing discrete data -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter10Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-25

Chapter 11 -- Multivariate analysis -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter11Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2022-02-01

Chapter 12 -- Visualising many responses -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter12Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2022-02-01

Chapter 13 -- Allometric line-fitting -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter13Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-16
Started: 2022-02-01

Chapter 14 -- Multivariate abundances -- inference about environmental associations -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter14Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2022-02-01

Chapter 15 -- Predicting multivariate abundances -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter15Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2022-02-01

Chapter 16 -- Understanding variation in environmental response across taxa -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter16Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2022-02-01

Chapter 17 -- Studying co-occurrence patterns -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter17Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-05-06
Started: 2022-02-01

Chapter 2 -- An importance equivalence result -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter2Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-05-06
Started: 2021-03-09

Chapter 3 -- Regression with multiple predictor variables -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter3Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-09

Chapter 4 -- Linear models -- anything goes -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter4Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-09

Chapter 5 -- Model selection -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter5Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-09

Chapter 6 -- Mixed effect models -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter6Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-06-09
Started: 2021-03-09

Chapter 7 -- Correlated samples in times, space, phylogeny... -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter7Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-12

Chapter 8 -- Wiggly Models -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter8Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-06-09
Started: 2021-03-12

Chapter 9 -- Design-based inference -- Exercise solutions and Code Boxes

David Warton

Rendered fromChapter9Solutions.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-25
Started: 2021-03-22

Eco-Stats -- Code and Data Accompanying the Eco-Stats Text

David Warton

Rendered fromecostats.Rmdusingknitr::rmarkdownon Feb 03 2025.

Last update: 2022-08-16
Started: 2022-08-16